2024 Adipocyte rna-seq

Adipocyte rna-seq

Author: mxxt

August undefined, 2024

WebJan 3, 2024 · To identify smORF-containing transcripts that are adipose specific, we analyzed mouse tissue RNA sequencing (RNA-seq) data from the ENCODE mouse project. 45 We then selected the smORF-containing transcripts with a TPM value of at least 1 and included these as a subset in an UpSet plot, only retaining groups with at least 20 …

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WebMar 16, 2024 · As expected, adipocytes were found only in the sNuc-seq dataset. The sNuc-seq data were also enriched for vascular cells and macrophages, probably because collagenase digestion did not fully... WebMar 7, 2024 · Results: In this study, we found that brown adipose tissue (BAT) existed within the perirenal fat at 1 day after birth (D1) and transferred into white adipose tissue (WAT) … terry azul1 youtube

Compression-induced dedifferentiation of adipocytes promotes tumor ...

WebApr 30, 2024 · a Single-cell RNA seq was performed on differentiating preadipocytes beginning at 80% confluency and differentiated for 7 days. PAGODA was used to … WebOct 28, 2024 · To comprehensively characterize mature subpopulations of brown adipocytes, we performed single-nucleus RNA sequencing (snRNA-seq) 12, 13 in … WebEndometrial cancer (EC) is the fourth most common cancer in women, and half of the endometrioid EC (EEC) cases are attributable to obesity. However, the underlying mechanism(s) of obesity-driven EEC remain(s) unclear. In this study, we examined whether LIF signaling plays a role in the obesity-driven progression of EEC. RNA-seq analysis of … terry babb obituary

Whole transcriptome RNA-seq reveals key regulatory factors

Full article: RNA-Seq and lipidomics reveal different adipogenic ...

WebApr 11, 2024 · To systematically dissect the transcriptomic differences between homeostasis and chronic dry skin at the single-cell level, we carried out scRNA-seq on two biological mixed samples from each group, and each mixed sample contained three mice (Fig. 1 A).After quality control, we obtained 18,578 cells in the AEW groups and 24,160 cells in … WebSep 9, 2016 · Adipogenesis of primary brown preadipocytes In order to get a global view of gene expression during adipogenesis of brown preadipocytes, RNA-Seq was performed to identify the genes involved and their function. RNA was isolated from primary cultured brown preadipocytes (D0) and differentiated adipocytes (D7). terry babcockWebThese RNA sequencing data involved macrophage polarization, which was important for macrophage inflammation and energy metabolism in adipose tissues. First, we found 768 genetic markers of M1 macrophages from the published bulk RNA dataset GSE69607 that showed higher expression levels in M1 macrophages than other types. trigger leash snap dog

"WebJul 5, 2024 · Adipose tissue is an important regulator of whole-body metabolism and energy homeostasis. The unprecedented growth of obesity and metabolic disease worldwide has required paralleled advancements in research on this dynamic endocrine organ system. Single-cell RNA sequencing (scRNA-seq), a highly meti … " - Adipocyte rna-seq

Adipocyte rna-seq

Compression-induced dedifferentiation of adipocytes promotes tumor ...

WebWe analyzed adipose gene expression using RNA sequencing in the fenofibrate and omega-3 fatty acid modulation of endotoxemia (FFAME) trial of healthy individuals at three … WebJun 1, 2024 · RNA-seq was employed to acquire the pectorales and crureuse transcriptome of ZD and AA chickens, with the aim of determining the potential molecular mechanism underlying chicken meat quality, flavor, and growth and development. We selected four mix sample separate cDNA libraries for RNA-seq.

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WebJan 22, 2024 · The RNA was extracted on the 25th day (10 days of osmotic compression and 14 days of colony expansion) for RNA-seq. Library construction of digital gene expression sequencing generated tags with 21 base pairs (bp) from the 3′ ends of each transcript, and these tags were used to represent the expression levels of transcripts. WebNational Center for Biotechnology Information

WebSep 16, 2024 · The transcriptome data was generated from the different stages of the 3T3-L1 adipocytes using RNA-seq technology. Table 2 briefly summarizes the information of … WebFeb 7, 2024 · This dataset contains key characteristics about the data described in the Data Descriptor RNA-seq profiling of white and brown adipocyte differentiation treated with epigallocatechin gallate. Contents: 1. human readable metadata summary table in CSV format 2. machine readable metadata file in JSON format

WebSeveral studies have highlighted the relevance of lncRNAs in adipocyte differentiation, but the precise molecular mechanism has largely remained elusive. In the present study, we … WebAug 8, 2024 · RNA extraction and RNA-seq analysis were performed by NovoGene (Beijing, China), the sequencing platform was illumina novaseq 6000, and the read length was 150bp. The sampling time points were listed in Figure 1. FeatureCounts (1.5.0-p3) is used to calculate the reads mapped to each gene.

WebMar 25, 2024 · However, single-nuclei RNA sequencing (sn-RNAseq) and spatial transcriptomics have created an avenue to explore the complexity of adipocyte status and function in vivo. While current knowledge keeps expanding, it is now clear that distinct adipocyte populations exist within WAT depots.

WebWhite adipose tissue (WAT) distribution is sex dependent. Adipocyte hyperplasia contributes to WAT distribution in mice driven by cues in the tissue m… trigger logic app from powershellWebMar 8, 2024 · We performed RNA-Seq on adipocytes isolated from three different adipose depots (BAT, iWAT, and eWAT) in HFD and ND. More than 200 million paired-end reads … terry babb sprint carWebMay 20, 2024 · Whole transcriptome RNA-seq reveals key regulatory factors involved in type 2 diabetes pathology in peripheral fat of Asian Indians Aditya Saxena, Nitish Mathur, Pradeep Tiwari & Sandeep Kumar... terry babcock obituaryWebOct 23, 2024 · Additionally, single-cell RNA-sequencing (scRNA-Seq) of adipose stromal populations revealed an increase in IL10-producing adaptive immune cells under … trigger logic app from http requestWebSep 22, 2024 · In COVID-19 autopsy cases, we identified SARS-CoV-2 RNA in adipocytes with an associated inflammatory infiltrate. We identified two distinct cellular targets of infection: adipocytes and a subset of inflammatory adipose tissue–resident macrophages. terry babb racingWebDec 3, 2024 · Transcriptome-wide m 6 A-Seq Reveals Global m 6 A Modification Patterns During Yak Adipocyte Differentiation. The yak adipocyte and preadipocyte of three biological replicates were used for transcriptome-wide m 6 A-sequencing (m 6 A-seq) and RNA-sequencing (RNA-seq) assays. In total, 12 libraries were sequenced, comprising … trigger logic app from powerappsWebEndometrial cancer (EC) is the fourth most common cancer in women, and half of the endometrioid EC (EEC) cases are attributable to obesity. However, the underlying … terry babb decatur il obituary